Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Gm45417-201ENSMUST00000209533 758 ntBASIC14.22□□□□□ -0.13
Smim3Q99PE5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.22□□□□□ -0.13
Smim3Q99PE5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim3Q99PE5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim3Q99PE5 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim3Q99PE5 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.21□□□□□ -0.13
Smim3Q99PE5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.21□□□□□ -0.13
Smim3Q99PE5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim3Q99PE5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim3Q99PE5 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smim3Q99PE5 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim3Q99PE5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim3Q99PE5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim3Q99PE5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim3Q99PE5 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.21□□□□□ -0.13
Smim3Q99PE5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Smim3Q99PE5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim3Q99PE5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Smim3Q99PE5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.21□□□□□ -0.13
Smim3Q99PE5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim3Q99PE5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim3Q99PE5 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.21□□□□□ -0.13
Smim3Q99PE5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smim3Q99PE5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smim3Q99PE5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smim3Q99PE5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Smim3Q99PE5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Smim3Q99PE5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smim3Q99PE5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim3Q99PE5 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim3Q99PE5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smim3Q99PE5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms