Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col25a1Q99MQ5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col25a1Q99MQ5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col25a1Q99MQ5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col25a1Q99MQ5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col25a1Q99MQ5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col25a1Q99MQ5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Col25a1Q99MQ5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col25a1Q99MQ5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Mir7023-201ENSMUST00000185093 64 ntBASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Col25a1Q99MQ5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col25a1Q99MQ5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Gm13418-201ENSMUST00000119097 944 ntBASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Col25a1Q99MQ5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms