Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rnf111Q99ML9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf111Q99ML9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf111Q99ML9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf111Q99ML9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rnf111Q99ML9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf111Q99ML9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf111Q99ML9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.1■□□□□ 0.17
Rnf111Q99ML9 Mir5122-201ENSMUST00000175004 89 ntBASIC16.1■□□□□ 0.17
Rnf111Q99ML9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.1■□□□□ 0.17
Rnf111Q99ML9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rnf111Q99ML9 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.1■□□□□ 0.17
Rnf111Q99ML9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf111Q99ML9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf111Q99ML9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf111Q99ML9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf111Q99ML9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rnf111Q99ML9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Gm37025-201ENSMUST00000195159 829 ntBASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rnf111Q99ML9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf111Q99ML9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Rnf111Q99ML9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf111Q99ML9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf111Q99ML9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf111Q99ML9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf111Q99ML9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf111Q99ML9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf111Q99ML9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf111Q99ML9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf111Q99ML9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf111Q99ML9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf111Q99ML9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf111Q99ML9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf111Q99ML9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rnf111Q99ML9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf111Q99ML9 Odf3b-204ENSMUST00000227834 930 ntBASIC16.08■□□□□ 0.16
Rnf111Q99ML9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf111Q99ML9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf111Q99ML9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf111Q99ML9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rnf111Q99ML9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf111Q99ML9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf111Q99ML9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf111Q99ML9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf111Q99ML9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rnf111Q99ML9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf111Q99ML9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf111Q99ML9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf111Q99ML9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf111Q99ML9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rnf111Q99ML9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf111Q99ML9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf111Q99ML9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rnf111Q99ML9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf111Q99ML9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.06■□□□□ 0.16
Rnf111Q99ML9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf111Q99ML9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms