Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SncaipQ99ME3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
SncaipQ99ME3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.14■□□□□ 0.33
SncaipQ99ME3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SncaipQ99ME3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SncaipQ99ME3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SncaipQ99ME3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SncaipQ99ME3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SncaipQ99ME3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SncaipQ99ME3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SncaipQ99ME3 Gm10231-201ENSMUST00000181584 441 ntBASIC17.14■□□□□ 0.33
SncaipQ99ME3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SncaipQ99ME3 Gm10175-202ENSMUST00000208752 441 ntBASIC17.14■□□□□ 0.33
SncaipQ99ME3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.14■□□□□ 0.33
SncaipQ99ME3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SncaipQ99ME3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SncaipQ99ME3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SncaipQ99ME3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SncaipQ99ME3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SncaipQ99ME3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SncaipQ99ME3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.12■□□□□ 0.33
SncaipQ99ME3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SncaipQ99ME3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Haglr-201ENSMUST00000100000 2085 ntBASIC17.11■□□□□ 0.33
SncaipQ99ME3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.11■□□□□ 0.33
SncaipQ99ME3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Gm18032-201ENSMUST00000222541 538 ntBASIC17.11■□□□□ 0.33
SncaipQ99ME3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SncaipQ99ME3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SncaipQ99ME3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SncaipQ99ME3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SncaipQ99ME3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SncaipQ99ME3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SncaipQ99ME3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SncaipQ99ME3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.1■□□□□ 0.33
SncaipQ99ME3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.1■□□□□ 0.33
SncaipQ99ME3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms