Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx1Q91VR5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx1Q91VR5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx1Q91VR5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ddx1Q91VR5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Actl10-202ENSMUST00000226583 1501 ntBASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Phf7-203ENSMUST00000226565 1971 ntBASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ddx1Q91VR5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx1Q91VR5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.09■□□□□ 0.33
Ddx1Q91VR5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Gm10566-201ENSMUST00000086739 996 ntBASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx1Q91VR5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ddx1Q91VR5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx1Q91VR5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx1Q91VR5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx1Q91VR5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx1Q91VR5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx1Q91VR5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx1Q91VR5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx1Q91VR5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx1Q91VR5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ddx1Q91VR5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ddx1Q91VR5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx1Q91VR5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ddx1Q91VR5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.08■□□□□ 0.32
Ddx1Q91VR5 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx1Q91VR5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Ddx1Q91VR5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.08■□□□□ 0.32
Ddx1Q91VR5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx1Q91VR5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ddx1Q91VR5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.08■□□□□ 0.32
Ddx1Q91VR5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx1Q91VR5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx1Q91VR5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms