Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx41Q91VN6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx41Q91VN6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx41Q91VN6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx41Q91VN6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx41Q91VN6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx41Q91VN6 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.01■□□□□ 0.63
Ddx41Q91VN6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.01■□□□□ 0.63
Ddx41Q91VN6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx41Q91VN6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx41Q91VN6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx41Q91VN6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx41Q91VN6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ddx41Q91VN6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx41Q91VN6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx41Q91VN6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19■□□□□ 0.63
Ddx41Q91VN6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx41Q91VN6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx41Q91VN6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ddx41Q91VN6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx41Q91VN6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx41Q91VN6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19■□□□□ 0.63
Ddx41Q91VN6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ddx41Q91VN6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx41Q91VN6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx41Q91VN6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx41Q91VN6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx41Q91VN6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ddx41Q91VN6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ddx41Q91VN6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ddx41Q91VN6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Gm37722-201ENSMUST00000193757 208 ntBASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx41Q91VN6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Gm11950-201ENSMUST00000121615 838 ntBASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx41Q91VN6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Gm27741-201ENSMUST00000185060 237 ntBASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.97■□□□□ 0.63
Ddx41Q91VN6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms