Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim60Q8VI40 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim60Q8VI40 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim60Q8VI40 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim60Q8VI40 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.16■□□□□ 0.34
Trim60Q8VI40 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.16■□□□□ 0.34
Trim60Q8VI40 Gm20760-201ENSMUST00000179197 648 ntBASIC17.16■□□□□ 0.34
Trim60Q8VI40 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim60Q8VI40 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim60Q8VI40 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim60Q8VI40 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim60Q8VI40 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim60Q8VI40 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim60Q8VI40 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trim60Q8VI40 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim60Q8VI40 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.13■□□□□ 0.33
Trim60Q8VI40 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Mir1199-201ENSMUST00000117015 119 ntBASIC17.13■□□□□ 0.33
Trim60Q8VI40 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.13■□□□□ 0.33
Trim60Q8VI40 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms