Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40cQ8VHQ4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40cQ8VHQ4 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.59□□□□□ -0.23
Rab40cQ8VHQ4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40cQ8VHQ4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rab40cQ8VHQ4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rab40cQ8VHQ4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Rab40cQ8VHQ4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rab40cQ8VHQ4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rab40cQ8VHQ4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rab40cQ8VHQ4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Gm37179-201ENSMUST00000194862 823 ntBASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab40cQ8VHQ4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rab40cQ8VHQ4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Mir5133-201ENSMUST00000174955 77 ntBASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.56□□□□□ -0.24
Rab40cQ8VHQ4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms