Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg1dQ8VE91 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg1dQ8VE91 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retreg1dQ8VE91 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg1dQ8VE91 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Retreg1dQ8VE91 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Retreg1dQ8VE91 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg1dQ8VE91 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Gm11355-201ENSMUST00000121120 306 ntBASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Gm9013-201ENSMUST00000132939 882 ntBASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Actl10-202ENSMUST00000226583 1501 ntBASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg1dQ8VE91 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Gm7284-201ENSMUST00000131667 944 ntBASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retreg1dQ8VE91 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg1dQ8VE91 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Gm29518-201ENSMUST00000190858 372 ntBASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg1dQ8VE91 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms