Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rprd1aQ8VDS4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Mir770-201ENSMUST00000103252 94 ntBASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rprd1aQ8VDS4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Gm6623-201ENSMUST00000173570 544 ntBASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Gm29518-201ENSMUST00000190858 372 ntBASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.05■□□□□ 0.32
Rprd1aQ8VDS4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Gm33142-201ENSMUST00000193913 867 ntBASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Gm44450-201ENSMUST00000199528 114 ntBASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Gm17808-201ENSMUST00000200859 894 ntBASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rprd1aQ8VDS4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rprd1aQ8VDS4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rprd1aQ8VDS4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.03■□□□□ 0.32
Rprd1aQ8VDS4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rprd1aQ8VDS4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rprd1aQ8VDS4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rprd1aQ8VDS4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rprd1aQ8VDS4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms