Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpusd1Q8VCZ8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rpusd1Q8VCZ8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpusd1Q8VCZ8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rpusd1Q8VCZ8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.79■□□□□ 0.12
Rpusd1Q8VCZ8 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.79■□□□□ 0.12
Rpusd1Q8VCZ8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
Rpusd1Q8VCZ8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.79■□□□□ 0.12
Rpusd1Q8VCZ8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Rpusd1Q8VCZ8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rpusd1Q8VCZ8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.79■□□□□ 0.12
Rpusd1Q8VCZ8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpusd1Q8VCZ8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rpusd1Q8VCZ8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpusd1Q8VCZ8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpusd1Q8VCZ8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpusd1Q8VCZ8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpusd1Q8VCZ8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpusd1Q8VCZ8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpusd1Q8VCZ8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpusd1Q8VCZ8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpusd1Q8VCZ8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpusd1Q8VCZ8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpusd1Q8VCZ8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.77■□□□□ 0.12
Rpusd1Q8VCZ8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.77■□□□□ 0.12
Rpusd1Q8VCZ8 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.77■□□□□ 0.12
Rpusd1Q8VCZ8 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.77■□□□□ 0.12
Rpusd1Q8VCZ8 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.77■□□□□ 0.12
Rpusd1Q8VCZ8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpusd1Q8VCZ8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpusd1Q8VCZ8 Rarb-207ENSMUST00000225921 2756 ntBASIC15.77■□□□□ 0.11
Rpusd1Q8VCZ8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpusd1Q8VCZ8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpusd1Q8VCZ8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Rpusd1Q8VCZ8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpusd1Q8VCZ8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpusd1Q8VCZ8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpusd1Q8VCZ8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.77■□□□□ 0.11
Rpusd1Q8VCZ8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 AW822252-206ENSMUST00000208904 237 ntBASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpusd1Q8VCZ8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Gm6296-201ENSMUST00000222599 943 ntBASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.75■□□□□ 0.11
Rpusd1Q8VCZ8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rpusd1Q8VCZ8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.74■□□□□ 0.11
Rpusd1Q8VCZ8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms