Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc9Q8VC31 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Gm37019-201ENSMUST00000192133 2134 ntBASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc9Q8VC31 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc9Q8VC31 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ccdc9Q8VC31 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc9Q8VC31 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
Ccdc9Q8VC31 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc9Q8VC31 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc9Q8VC31 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.02■□□□□ 0.8
Ccdc9Q8VC31 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc9Q8VC31 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc9Q8VC31 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc9Q8VC31 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc9Q8VC31 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc9Q8VC31 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
Ccdc9Q8VC31 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.02■□□□□ 0.79
Ccdc9Q8VC31 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Ccdc9Q8VC31 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc9Q8VC31 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc9Q8VC31 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc9Q8VC31 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC20■□□□□ 0.79
Ccdc9Q8VC31 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc9Q8VC31 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ccdc9Q8VC31 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc9Q8VC31 Gm38345-201ENSMUST00000192635 1748 ntBASIC20■□□□□ 0.79
Ccdc9Q8VC31 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20■□□□□ 0.79
Ccdc9Q8VC31 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ccdc9Q8VC31 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
Ccdc9Q8VC31 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc9Q8VC31 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc9Q8VC31 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc9Q8VC31 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc9Q8VC31 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc9Q8VC31 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc9Q8VC31 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20■□□□□ 0.79
Ccdc9Q8VC31 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc9Q8VC31 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc9Q8VC31 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc9Q8VC31 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms