Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup58Q8R332 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup58Q8R332 Dancr-204ENSMUST00000132389 2347 ntBASIC17.78■□□□□ 0.44
Nup58Q8R332 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup58Q8R332 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nup58Q8R332 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup58Q8R332 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nup58Q8R332 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.78■□□□□ 0.44
Nup58Q8R332 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup58Q8R332 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup58Q8R332 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nup58Q8R332 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup58Q8R332 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nup58Q8R332 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Nup58Q8R332 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup58Q8R332 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup58Q8R332 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup58Q8R332 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup58Q8R332 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup58Q8R332 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup58Q8R332 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup58Q8R332 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.77■□□□□ 0.44
Nup58Q8R332 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Nup58Q8R332 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Nup58Q8R332 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Nup58Q8R332 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Nup58Q8R332 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.77■□□□□ 0.44
Nup58Q8R332 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.77■□□□□ 0.44
Nup58Q8R332 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Nup58Q8R332 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Nup58Q8R332 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Nup58Q8R332 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup58Q8R332 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.77■□□□□ 0.44
Nup58Q8R332 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup58Q8R332 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nup58Q8R332 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup58Q8R332 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup58Q8R332 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup58Q8R332 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nup58Q8R332 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup58Q8R332 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup58Q8R332 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup58Q8R332 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup58Q8R332 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nup58Q8R332 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup58Q8R332 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup58Q8R332 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup58Q8R332 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nup58Q8R332 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nup58Q8R332 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup58Q8R332 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup58Q8R332 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Nup58Q8R332 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nup58Q8R332 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nup58Q8R332 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Nup58Q8R332 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.76■□□□□ 0.43
Nup58Q8R332 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup58Q8R332 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Nup58Q8R332 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup58Q8R332 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nup58Q8R332 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup58Q8R332 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup58Q8R332 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Nup58Q8R332 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.76■□□□□ 0.43
Nup58Q8R332 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nup58Q8R332 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.75■□□□□ 0.43
Nup58Q8R332 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Nup58Q8R332 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.75■□□□□ 0.43
Nup58Q8R332 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.75■□□□□ 0.43
Nup58Q8R332 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.75■□□□□ 0.43
Nup58Q8R332 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nup58Q8R332 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Nup58Q8R332 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nup58Q8R332 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.75■□□□□ 0.43
Nup58Q8R332 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup58Q8R332 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup58Q8R332 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup58Q8R332 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup58Q8R332 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup58Q8R332 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms