Protein–RNA interactions for Protein: Q8R2U7

Lrrc42, Leucine-rich repeat-containing protein 42, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc42Q8R2U7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrc42Q8R2U7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrc42Q8R2U7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc42Q8R2U7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc42Q8R2U7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Gm2274-201ENSMUST00000184539 609 ntBASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.27■□□□□ 0.36
Lrrc42Q8R2U7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lrrc42Q8R2U7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc42Q8R2U7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc42Q8R2U7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms