Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp7Q8R1T1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp7Q8R1T1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp7Q8R1T1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC21.19■□□□□ 0.98
Chmp7Q8R1T1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.19■□□□□ 0.98
Chmp7Q8R1T1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp7Q8R1T1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC21.19■□□□□ 0.98
Chmp7Q8R1T1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp7Q8R1T1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp7Q8R1T1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp7Q8R1T1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp7Q8R1T1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp7Q8R1T1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Gm18206-201ENSMUST00000207027 926 ntBASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 CT009713.7-201ENSMUST00000224689 571 ntBASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp7Q8R1T1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp7Q8R1T1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.17■□□□□ 0.98
Chmp7Q8R1T1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp7Q8R1T1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp7Q8R1T1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp7Q8R1T1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp7Q8R1T1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp7Q8R1T1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp7Q8R1T1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp7Q8R1T1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp7Q8R1T1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp7Q8R1T1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Chmp7Q8R1T1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Chmp7Q8R1T1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chmp7Q8R1T1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Gm18856-201ENSMUST00000178096 1374 ntBASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 AC138767.1-201ENSMUST00000222661 415 ntBASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 AC114585.2-202ENSMUST00000228094 426 ntBASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chmp7Q8R1T1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Mir5131-201ENSMUST00000175426 93 ntBASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chmp7Q8R1T1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chmp7Q8R1T1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chmp7Q8R1T1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chmp7Q8R1T1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Chmp7Q8R1T1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chmp7Q8R1T1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chmp7Q8R1T1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chmp7Q8R1T1 Gm9889-202ENSMUST00000206983 1577 ntBASIC21.14■□□□□ 0.97
Chmp7Q8R1T1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chmp7Q8R1T1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms