Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.6■□□□□ 0.73
Atf7Q8R0S1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Gm26039-201ENSMUST00000158152 144 ntBASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.59■□□□□ 0.73
Atf7Q8R0S1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Atf7Q8R0S1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.58■□□□□ 0.73
Atf7Q8R0S1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.58■□□□□ 0.72
Atf7Q8R0S1 Gm11336-201ENSMUST00000118168 334 ntBASIC19.58■□□□□ 0.72
Atf7Q8R0S1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.58■□□□□ 0.72
Atf7Q8R0S1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.58■□□□□ 0.72
Atf7Q8R0S1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf7Q8R0S1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf7Q8R0S1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf7Q8R0S1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf7Q8R0S1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf7Q8R0S1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf7Q8R0S1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Atf7Q8R0S1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf7Q8R0S1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Gm18421-201ENSMUST00000204122 625 ntBASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf7Q8R0S1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf7Q8R0S1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.55■□□□□ 0.72
Atf7Q8R0S1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.55■□□□□ 0.72
Atf7Q8R0S1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Atf7Q8R0S1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Atf7Q8R0S1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf7Q8R0S1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf7Q8R0S1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf7Q8R0S1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Atf7Q8R0S1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf7Q8R0S1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf7Q8R0S1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.55■□□□□ 0.72
Atf7Q8R0S1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
Atf7Q8R0S1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms