Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Asic1-205ENSMUST00000228185 1818 ntBASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.17■□□□□ 0.02
Ebf4Q8K4J2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Gm7291-201ENSMUST00000199147 382 ntBASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Mtag2-201ENSMUST00000058665 714 ntBASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Ebf4Q8K4J2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Gm7514-201ENSMUST00000209475 934 ntBASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf4Q8K4J2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Flg-201ENSMUST00000050758 1488 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms