Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lrrtm1Q8K377 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Lrrtm1Q8K377 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.27□□□□□ -0.13
Lrrtm1Q8K377 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrrtm1Q8K377 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lrrtm1Q8K377 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Lrrtm1Q8K377 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lrrtm1Q8K377 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrrtm1Q8K377 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lrrtm1Q8K377 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lrrtm1Q8K377 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrrtm1Q8K377 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrrtm1Q8K377 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrrtm1Q8K377 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrrtm1Q8K377 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lrrtm1Q8K377 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lrrtm1Q8K377 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lrrtm1Q8K377 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Dio3-201ENSMUST00000097228 1449 ntBASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Gm27405-201ENSMUST00000184201 112 ntBASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lrrtm1Q8K377 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms