Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim5Q8CI51 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pdlim5Q8CI51 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Pdlim5Q8CI51 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.23■□□□□ 0.03
Pdlim5Q8CI51 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms