Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sox30Q8CGW4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sox30Q8CGW4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sox30Q8CGW4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Sox30Q8CGW4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sox30Q8CGW4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.14■□□□□ 0.49
Sox30Q8CGW4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox30Q8CGW4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sox30Q8CGW4 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.14■□□□□ 0.49
Sox30Q8CGW4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox30Q8CGW4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.14■□□□□ 0.49
Sox30Q8CGW4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sox30Q8CGW4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Sox30Q8CGW4 Gm44450-201ENSMUST00000199528 114 ntBASIC18.14■□□□□ 0.49
Sox30Q8CGW4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sox30Q8CGW4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox30Q8CGW4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.14■□□□□ 0.49
Sox30Q8CGW4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox30Q8CGW4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sox30Q8CGW4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sox30Q8CGW4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Phf7-203ENSMUST00000226565 1971 ntBASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Gm36967-201ENSMUST00000193814 266 ntBASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox30Q8CGW4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Mir1199-201ENSMUST00000117015 119 ntBASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Gm3375-201ENSMUST00000203929 796 ntBASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sox30Q8CGW4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.11■□□□□ 0.49
Sox30Q8CGW4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Asic1-205ENSMUST00000228185 1818 ntBASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox30Q8CGW4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox30Q8CGW4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms