Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Gm13474-201ENSMUST00000122466 815 ntBASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Nup88Q8CEC0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup88Q8CEC0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup88Q8CEC0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup88Q8CEC0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup88Q8CEC0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup88Q8CEC0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Nup88Q8CEC0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup88Q8CEC0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nup88Q8CEC0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup88Q8CEC0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup88Q8CEC0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nup88Q8CEC0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Nup88Q8CEC0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Gm25016-201ENSMUST00000158399 131 ntBASIC19.52■□□□□ 0.72
Nup88Q8CEC0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms