Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc38Q8CDN8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc38Q8CDN8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc38Q8CDN8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc38Q8CDN8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc38Q8CDN8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ccdc38Q8CDN8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
Ccdc38Q8CDN8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Gm13186-201ENSMUST00000118031 316 ntBASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ccdc38Q8CDN8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc38Q8CDN8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc38Q8CDN8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc38Q8CDN8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc38Q8CDN8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc38Q8CDN8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Ccdc38Q8CDN8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Ccdc38Q8CDN8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Gm7370-201ENSMUST00000219471 767 ntBASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Gm5417-201ENSMUST00000079706 384 ntBASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc38Q8CDN8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms