Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lysmd4Q8CC84 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd4Q8CC84 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Gm15039-201ENSMUST00000118914 875 ntBASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Lysmd4Q8CC84 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd4Q8CC84 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.88□□□□□ -0.03
Lysmd4Q8CC84 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd4Q8CC84 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd4Q8CC84 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd4Q8CC84 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Lysmd4Q8CC84 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.88□□□□□ -0.03
Lysmd4Q8CC84 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.88□□□□□ -0.03
Lysmd4Q8CC84 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd4Q8CC84 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd4Q8CC84 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd4Q8CC84 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd4Q8CC84 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Lysmd4Q8CC84 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd4Q8CC84 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lysmd4Q8CC84 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms