Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.42■□□□□ 0.22
Aph1bQ8C7N7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Aph1bQ8C7N7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Aph1bQ8C7N7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Aph1bQ8C7N7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Aph1bQ8C7N7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Aph1bQ8C7N7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Aph1bQ8C7N7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Aph1bQ8C7N7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Aph1bQ8C7N7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Aph1bQ8C7N7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Actl10-202ENSMUST00000226583 1501 ntBASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Aph1bQ8C7N7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Aph1bQ8C7N7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Aph1bQ8C7N7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Aph1bQ8C7N7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Aph1bQ8C7N7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Aph1bQ8C7N7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Aph1bQ8C7N7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Aph1bQ8C7N7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Aph1bQ8C7N7 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.4■□□□□ 0.22
Aph1bQ8C7N7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Aph1bQ8C7N7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Aph1bQ8C7N7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Aph1bQ8C7N7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Aph1bQ8C7N7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Aph1bQ8C7N7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Aph1bQ8C7N7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Aph1bQ8C7N7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Gm7370-201ENSMUST00000219471 767 ntBASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Aph1bQ8C7N7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Aph1bQ8C7N7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Aph1bQ8C7N7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms