Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Gm18421-201ENSMUST00000204122 625 ntBASIC18.31■□□□□ 0.52
Trim9Q8C7M3 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim9Q8C7M3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim9Q8C7M3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim9Q8C7M3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Trim9Q8C7M3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim9Q8C7M3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim9Q8C7M3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim9Q8C7M3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim9Q8C7M3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Trim9Q8C7M3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim9Q8C7M3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim9Q8C7M3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim9Q8C7M3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim9Q8C7M3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim9Q8C7M3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trim9Q8C7M3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim9Q8C7M3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim9Q8C7M3 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.28■□□□□ 0.52
Trim9Q8C7M3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim9Q8C7M3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim9Q8C7M3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim9Q8C7M3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim9Q8C7M3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim9Q8C7M3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim9Q8C7M3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim9Q8C7M3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Trim9Q8C7M3 Gm18032-201ENSMUST00000222541 538 ntBASIC18.28■□□□□ 0.52
Trim9Q8C7M3 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.28■□□□□ 0.52
Trim9Q8C7M3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trim9Q8C7M3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim9Q8C7M3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim9Q8C7M3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim9Q8C7M3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim9Q8C7M3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.28■□□□□ 0.52
Trim9Q8C7M3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trim9Q8C7M3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trim9Q8C7M3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim9Q8C7M3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim9Q8C7M3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim9Q8C7M3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim9Q8C7M3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim9Q8C7M3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim9Q8C7M3 Gm29707-201ENSMUST00000196325 491 ntBASIC18.27■□□□□ 0.52
Trim9Q8C7M3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Trim9Q8C7M3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trim9Q8C7M3 Gm21559-201ENSMUST00000220638 855 ntBASIC18.27■□□□□ 0.52
Trim9Q8C7M3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim9Q8C7M3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim9Q8C7M3 Gm9987-201ENSMUST00000069768 567 ntBASIC18.27■□□□□ 0.52
Trim9Q8C7M3 Gm8587-201ENSMUST00000076538 843 ntBASIC18.27■□□□□ 0.52
Trim9Q8C7M3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms