Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Gm36967-201ENSMUST00000193814 266 ntBASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.42■□□□□ 0.7
Usp44Q8C2S0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp44Q8C2S0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp44Q8C2S0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp44Q8C2S0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp44Q8C2S0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp44Q8C2S0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.38■□□□□ 0.69
Usp44Q8C2S0 AA414768-201ENSMUST00000121924 1257 ntBASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms