Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Chd9Q8BYH8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd9Q8BYH8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd9Q8BYH8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.05□□□□□ -0.32
Chd9Q8BYH8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Chd9Q8BYH8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd9Q8BYH8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.05□□□□□ -0.32
Chd9Q8BYH8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd9Q8BYH8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd9Q8BYH8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd9Q8BYH8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd9Q8BYH8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Gm13186-201ENSMUST00000118031 316 ntBASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Gm44335-201ENSMUST00000196879 141 ntBASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Gm44297-201ENSMUST00000198304 141 ntBASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Gm44346-201ENSMUST00000198851 141 ntBASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd9Q8BYH8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.03□□□□□ -0.32
Chd9Q8BYH8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd9Q8BYH8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chd9Q8BYH8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Chd9Q8BYH8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chd9Q8BYH8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Chd9Q8BYH8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Chd9Q8BYH8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chd9Q8BYH8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chd9Q8BYH8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chd9Q8BYH8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.02□□□□□ -0.33
Chd9Q8BYH8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd9Q8BYH8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms