Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm11Q8BUV6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm11Q8BUV6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm11Q8BUV6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm11Q8BUV6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm11Q8BUV6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm11Q8BUV6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm11Q8BUV6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm11Q8BUV6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lsm11Q8BUV6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm11Q8BUV6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm11Q8BUV6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Lsm11Q8BUV6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm11Q8BUV6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Lsm11Q8BUV6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Lsm11Q8BUV6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm11Q8BUV6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Gm43371-201ENSMUST00000202838 1031 ntBASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm11Q8BUV6 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Gm12933-201ENSMUST00000120203 872 ntBASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Gm12382-201ENSMUST00000122005 922 ntBASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Gm17661-201ENSMUST00000170317 270 ntBASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Gm27000-201ENSMUST00000182943 842 ntBASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Gm27275-201ENSMUST00000184318 272 ntBASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm11Q8BUV6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm11Q8BUV6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm11Q8BUV6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms