Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Gm18421-201ENSMUST00000204122 625 ntBASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp43Q8BUM9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Gm22697-201ENSMUST00000175194 63 ntBASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Gm21559-201ENSMUST00000220638 855 ntBASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Gm8587-201ENSMUST00000076538 843 ntBASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Usp43Q8BUM9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Gm27389-201ENSMUST00000183622 195 ntBASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Gm18032-201ENSMUST00000222541 538 ntBASIC16.79■□□□□ 0.28
Usp43Q8BUM9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp43Q8BUM9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp43Q8BUM9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp43Q8BUM9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp43Q8BUM9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp43Q8BUM9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms