Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4Q8BQZ5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4Q8BQZ5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4Q8BQZ5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cpsf4Q8BQZ5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cpsf4Q8BQZ5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.08■□□□□ 0.17
Cpsf4Q8BQZ5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cpsf4Q8BQZ5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cpsf4Q8BQZ5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cpsf4Q8BQZ5 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cpsf4Q8BQZ5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 Gm13216-201ENSMUST00000117145 591 ntBASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 Gm7977-201ENSMUST00000193787 748 ntBASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.08■□□□□ 0.16
Cpsf4Q8BQZ5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms