Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smco3Q8BQM7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
Smco3Q8BQM7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smco3Q8BQM7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smco3Q8BQM7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smco3Q8BQM7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Gm13401-201ENSMUST00000117074 291 ntBASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smco3Q8BQM7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.71□□□□□ -0.21
Smco3Q8BQM7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smco3Q8BQM7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smco3Q8BQM7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smco3Q8BQM7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smco3Q8BQM7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smco3Q8BQM7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smco3Q8BQM7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smco3Q8BQM7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smco3Q8BQM7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smco3Q8BQM7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smco3Q8BQM7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smco3Q8BQM7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smco3Q8BQM7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Gm18671-201ENSMUST00000214826 683 ntBASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms