Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm5837-201ENSMUST00000191844 1369 ntBASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col16a1Q8BLX7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col16a1Q8BLX7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col16a1Q8BLX7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col16a1Q8BLX7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col16a1Q8BLX7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col16a1Q8BLX7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col16a1Q8BLX7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
Col16a1Q8BLX7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col16a1Q8BLX7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col16a1Q8BLX7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col16a1Q8BLX7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col16a1Q8BLX7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col16a1Q8BLX7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col16a1Q8BLX7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col16a1Q8BLX7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Col16a1Q8BLX7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.7■■□□□ 1.06
Col16a1Q8BLX7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col16a1Q8BLX7 Gm9172-201ENSMUST00000212092 954 ntBASIC21.7■■□□□ 1.06
Col16a1Q8BLX7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Col16a1Q8BLX7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Col16a1Q8BLX7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col16a1Q8BLX7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col16a1Q8BLX7 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.7■■□□□ 1.06
Col16a1Q8BLX7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Col16a1Q8BLX7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC21.7■■□□□ 1.06
Col16a1Q8BLX7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Col16a1Q8BLX7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Col16a1Q8BLX7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Col16a1Q8BLX7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col16a1Q8BLX7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col16a1Q8BLX7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col16a1Q8BLX7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col16a1Q8BLX7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col16a1Q8BLX7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col16a1Q8BLX7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col16a1Q8BLX7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col16a1Q8BLX7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col16a1Q8BLX7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC21.69■■□□□ 1.06
Col16a1Q8BLX7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC21.69■■□□□ 1.06
Col16a1Q8BLX7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC21.69■■□□□ 1.06
Col16a1Q8BLX7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col16a1Q8BLX7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.69■■□□□ 1.06
Col16a1Q8BLX7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 H2af-ps-201ENSMUST00000119066 295 ntBASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 Chchd1-203ENSMUST00000224633 557 ntBASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 Gm5648-201ENSMUST00000122244 1587 ntBASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Col16a1Q8BLX7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.67■■□□□ 1.06
Col16a1Q8BLX7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col16a1Q8BLX7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col16a1Q8BLX7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Col16a1Q8BLX7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC21.67■■□□□ 1.06
Col16a1Q8BLX7 Mir6404-201ENSMUST00000183699 94 ntBASIC21.67■■□□□ 1.06
Col16a1Q8BLX7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Col16a1Q8BLX7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col16a1Q8BLX7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col16a1Q8BLX7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.67■■□□□ 1.06
Col16a1Q8BLX7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Col16a1Q8BLX7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col16a1Q8BLX7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Col16a1Q8BLX7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Col16a1Q8BLX7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col16a1Q8BLX7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col16a1Q8BLX7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms