Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Il3ra-202ENSMUST00000223589 738 ntBASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdhr3Q8BL00 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Gm38027-201ENSMUST00000192315 235 ntBASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdhr3Q8BL00 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdhr3Q8BL00 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Gm18958-201ENSMUST00000174258 762 ntBASIC14.47□□□□□ -0.09
Cdhr3Q8BL00 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 387 ms