Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Gm9731-201ENSMUST00000209480 747 ntBASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2bQ8BJF9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chmp2bQ8BJF9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2bQ8BJF9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chmp2bQ8BJF9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2bQ8BJF9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2bQ8BJF9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2bQ8BJF9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.98■□□□□ 0.31
Chmp2bQ8BJF9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.98■□□□□ 0.31
Chmp2bQ8BJF9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.98■□□□□ 0.31
Chmp2bQ8BJF9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2bQ8BJF9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Chmp2bQ8BJF9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2bQ8BJF9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2bQ8BJF9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2bQ8BJF9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chmp2bQ8BJF9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2bQ8BJF9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2bQ8BJF9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Gm7638-201ENSMUST00000121348 967 ntBASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2bQ8BJF9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms