Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc116Q80X53 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc116Q80X53 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc116Q80X53 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc116Q80X53 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc116Q80X53 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc116Q80X53 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc116Q80X53 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc116Q80X53 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Gm13559-201ENSMUST00000120476 863 ntBASIC16.22■□□□□ 0.19
Ccdc116Q80X53 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Gm10566-201ENSMUST00000086739 996 ntBASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Actl10-202ENSMUST00000226583 1501 ntBASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc116Q80X53 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Dancr-204ENSMUST00000132389 2347 ntBASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms