Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm3Q80WV7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.32■□□□□ 0.36
Srrm3Q80WV7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.32■□□□□ 0.36
Srrm3Q80WV7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Srrm3Q80WV7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm3Q80WV7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm3Q80WV7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm3Q80WV7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Srrm3Q80WV7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.32■□□□□ 0.36
Srrm3Q80WV7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Srrm3Q80WV7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Srrm3Q80WV7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm3Q80WV7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm3Q80WV7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm3Q80WV7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm3Q80WV7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm3Q80WV7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm3Q80WV7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Srrm3Q80WV7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm3Q80WV7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm3Q80WV7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm3Q80WV7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm3Q80WV7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Srrm3Q80WV7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Srrm3Q80WV7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Mir5122-201ENSMUST00000175004 89 ntBASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Gm5417-201ENSMUST00000079706 384 ntBASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Srrm3Q80WV7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Srrm3Q80WV7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms