Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnrc18Q80WC3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.44■□□□□ 0.22
Tnrc18Q80WC3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnrc18Q80WC3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnrc18Q80WC3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.44■□□□□ 0.22
Tnrc18Q80WC3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Tnrc18Q80WC3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnrc18Q80WC3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnrc18Q80WC3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnrc18Q80WC3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.44■□□□□ 0.22
Tnrc18Q80WC3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnrc18Q80WC3 Gm8655-201ENSMUST00000221159 852 ntBASIC16.44■□□□□ 0.22
Tnrc18Q80WC3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnrc18Q80WC3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnrc18Q80WC3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnrc18Q80WC3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Tnrc18Q80WC3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnrc18Q80WC3 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.41■□□□□ 0.22
Tnrc18Q80WC3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnrc18Q80WC3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.41■□□□□ 0.22
Tnrc18Q80WC3 Gm5312-201ENSMUST00000203728 547 ntBASIC16.41■□□□□ 0.22
Tnrc18Q80WC3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnrc18Q80WC3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnrc18Q80WC3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnrc18Q80WC3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnrc18Q80WC3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tnrc18Q80WC3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnrc18Q80WC3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnrc18Q80WC3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnrc18Q80WC3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnrc18Q80WC3 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Gm13597-201ENSMUST00000121239 375 ntBASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnrc18Q80WC3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
Tnrc18Q80WC3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc18Q80WC3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc18Q80WC3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Tnrc18Q80WC3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnrc18Q80WC3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms