Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3tc2Q80VA5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3tc2Q80VA5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Gm37935-201ENSMUST00000192012 982 ntBASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3tc2Q80VA5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Sh3tc2Q80VA5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sh3tc2Q80VA5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sh3tc2Q80VA5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Sh3tc2Q80VA5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sh3tc2Q80VA5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.01■□□□□ 0.47
Sh3tc2Q80VA5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Gm12644-201ENSMUST00000119935 606 ntBASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Gm2651-201ENSMUST00000203560 838 ntBASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Sh3tc2Q80VA5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms