Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm4Q80V63 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm4Q80V63 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm4Q80V63 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm4Q80V63 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm4Q80V63 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Prdm4Q80V63 Gm20760-201ENSMUST00000179197 648 ntBASIC17.29■□□□□ 0.36
Prdm4Q80V63 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm4Q80V63 Gm2559-201ENSMUST00000201323 363 ntBASIC17.29■□□□□ 0.36
Prdm4Q80V63 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Prdm4Q80V63 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm4Q80V63 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm4Q80V63 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm4Q80V63 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm4Q80V63 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm4Q80V63 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.28■□□□□ 0.36
Prdm4Q80V63 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm4Q80V63 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.28■□□□□ 0.36
Prdm4Q80V63 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.28■□□□□ 0.36
Prdm4Q80V63 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm4Q80V63 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Prdm4Q80V63 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.27■□□□□ 0.36
Prdm4Q80V63 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm4Q80V63 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm4Q80V63 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Prdm4Q80V63 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm4Q80V63 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm4Q80V63 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm4Q80V63 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm4Q80V63 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.27■□□□□ 0.36
Prdm4Q80V63 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.27■□□□□ 0.36
Prdm4Q80V63 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.27■□□□□ 0.36
Prdm4Q80V63 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm4Q80V63 Dio3-201ENSMUST00000097228 1449 ntBASIC17.27■□□□□ 0.35
Prdm4Q80V63 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prdm4Q80V63 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.27■□□□□ 0.35
Prdm4Q80V63 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Prdm4Q80V63 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prdm4Q80V63 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prdm4Q80V63 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Prdm4Q80V63 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prdm4Q80V63 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prdm4Q80V63 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm4Q80V63 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.26■□□□□ 0.35
Prdm4Q80V63 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Prdm4Q80V63 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Prdm4Q80V63 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.25■□□□□ 0.35
Prdm4Q80V63 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm4Q80V63 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.25■□□□□ 0.35
Prdm4Q80V63 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm4Q80V63 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms