Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh19Q80TF3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh19Q80TF3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh19Q80TF3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh19Q80TF3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh19Q80TF3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh19Q80TF3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh19Q80TF3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdh19Q80TF3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.27■□□□□ 0.2
Pcdh19Q80TF3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh19Q80TF3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Pcdh19Q80TF3 Gm28033-201ENSMUST00000184224 96 ntBASIC16.27■□□□□ 0.2
Pcdh19Q80TF3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh19Q80TF3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh19Q80TF3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh19Q80TF3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.27■□□□□ 0.19
Pcdh19Q80TF3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh19Q80TF3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh19Q80TF3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh19Q80TF3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pcdh19Q80TF3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh19Q80TF3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Gm17971-201ENSMUST00000190239 806 ntBASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdh19Q80TF3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh19Q80TF3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh19Q80TF3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh19Q80TF3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh19Q80TF3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh19Q80TF3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdh19Q80TF3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Pcdh19Q80TF3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh19Q80TF3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh19Q80TF3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Pcdh19Q80TF3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdh19Q80TF3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh19Q80TF3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh19Q80TF3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh19Q80TF3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh19Q80TF3 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdh19Q80TF3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms