Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.16■□□□□ 0.18
Scn4bQ7M729 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scn4bQ7M729 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn4bQ7M729 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn4bQ7M729 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.15■□□□□ 0.18
Scn4bQ7M729 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Phf7-203ENSMUST00000226565 1971 ntBASIC16.15■□□□□ 0.18
Scn4bQ7M729 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Gm13474-201ENSMUST00000122466 815 ntBASIC16.15■□□□□ 0.18
Scn4bQ7M729 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.15■□□□□ 0.18
Scn4bQ7M729 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.15■□□□□ 0.18
Scn4bQ7M729 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.15■□□□□ 0.18
Scn4bQ7M729 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn4bQ7M729 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.14■□□□□ 0.18
Scn4bQ7M729 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Scn4bQ7M729 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Gm6433-201ENSMUST00000118634 875 ntBASIC16.14■□□□□ 0.17
Scn4bQ7M729 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scn4bQ7M729 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.13■□□□□ 0.17
Scn4bQ7M729 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.13■□□□□ 0.17
Scn4bQ7M729 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.13■□□□□ 0.17
Scn4bQ7M729 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Scn4bQ7M729 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn4bQ7M729 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn4bQ7M729 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn4bQ7M729 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.12■□□□□ 0.17
Scn4bQ7M729 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Scn4bQ7M729 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn4bQ7M729 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn4bQ7M729 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn4bQ7M729 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Scn4bQ7M729 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scn4bQ7M729 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.12■□□□□ 0.17
Scn4bQ7M729 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.12■□□□□ 0.17
Scn4bQ7M729 Gm7889-201ENSMUST00000185591 958 ntBASIC16.12■□□□□ 0.17
Scn4bQ7M729 Gm7213-201ENSMUST00000215977 950 ntBASIC16.12■□□□□ 0.17
Scn4bQ7M729 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn4bQ7M729 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn4bQ7M729 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Scn4bQ7M729 Gm10566-201ENSMUST00000086739 996 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms