Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssx9Q6XAS3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssx9Q6XAS3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ssx9Q6XAS3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ssx9Q6XAS3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Ssx9Q6XAS3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssx9Q6XAS3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Ssx9Q6XAS3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssx9Q6XAS3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssx9Q6XAS3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ssx9Q6XAS3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Ssx9Q6XAS3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ssx9Q6XAS3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ssx9Q6XAS3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.52■□□□□ 0.24
Ssx9Q6XAS3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.52■□□□□ 0.24
Ssx9Q6XAS3 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.52■□□□□ 0.24
Ssx9Q6XAS3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ssx9Q6XAS3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ssx9Q6XAS3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ssx9Q6XAS3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Ssx9Q6XAS3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ssx9Q6XAS3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ssx9Q6XAS3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ssx9Q6XAS3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ssx9Q6XAS3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ssx9Q6XAS3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssx9Q6XAS3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ssx9Q6XAS3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Gm5417-201ENSMUST00000079706 384 ntBASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Ssx9Q6XAS3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ssx9Q6XAS3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ssx9Q6XAS3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ssx9Q6XAS3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ssx9Q6XAS3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ssx9Q6XAS3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ssx9Q6XAS3 Gm13186-201ENSMUST00000118031 316 ntBASIC16.48■□□□□ 0.23
Ssx9Q6XAS3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
Ssx9Q6XAS3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ssx9Q6XAS3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ssx9Q6XAS3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ssx9Q6XAS3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms