Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1l1Q6T3U4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1l1Q6T3U4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1l1Q6T3U4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Npc1l1Q6T3U4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.84■□□□□ 0.77
Npc1l1Q6T3U4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1l1Q6T3U4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1l1Q6T3U4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Npc1l1Q6T3U4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1l1Q6T3U4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Npc1l1Q6T3U4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Npc1l1Q6T3U4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Npc1l1Q6T3U4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Npc1l1Q6T3U4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Npc1l1Q6T3U4 Gm13884-201ENSMUST00000118103 829 ntBASIC19.83■□□□□ 0.77
Npc1l1Q6T3U4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.83■□□□□ 0.77
Npc1l1Q6T3U4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.83■□□□□ 0.77
Npc1l1Q6T3U4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Npc1l1Q6T3U4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Npc1l1Q6T3U4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.83■□□□□ 0.77
Npc1l1Q6T3U4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Npc1l1Q6T3U4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Npc1l1Q6T3U4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Npc1l1Q6T3U4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Npc1l1Q6T3U4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Npc1l1Q6T3U4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Npc1l1Q6T3U4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.82■□□□□ 0.76
Npc1l1Q6T3U4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Npc1l1Q6T3U4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Npc1l1Q6T3U4 Gm43347-201ENSMUST00000200226 580 ntBASIC19.82■□□□□ 0.76
Npc1l1Q6T3U4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Npc1l1Q6T3U4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Npc1l1Q6T3U4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Npc1l1Q6T3U4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Npc1l1Q6T3U4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Npc1l1Q6T3U4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Npc1l1Q6T3U4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Npc1l1Q6T3U4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Npc1l1Q6T3U4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.81■□□□□ 0.76
Npc1l1Q6T3U4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Npc1l1Q6T3U4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Npc1l1Q6T3U4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.81■□□□□ 0.76
Npc1l1Q6T3U4 Mir8098-201ENSMUST00000184011 137 ntBASIC19.81■□□□□ 0.76
Npc1l1Q6T3U4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.81■□□□□ 0.76
Npc1l1Q6T3U4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Npc1l1Q6T3U4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Npc1l1Q6T3U4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Npc1l1Q6T3U4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Npc1l1Q6T3U4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Npc1l1Q6T3U4 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.8■□□□□ 0.76
Npc1l1Q6T3U4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 Gm15372-201ENSMUST00000120729 834 ntBASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 Gm43514-201ENSMUST00000198852 424 ntBASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1l1Q6T3U4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Gm6443-201ENSMUST00000203599 874 ntBASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.78■□□□□ 0.76
Npc1l1Q6T3U4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms