Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx58Q6Q899 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx58Q6Q899 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx58Q6Q899 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx58Q6Q899 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx58Q6Q899 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx58Q6Q899 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx58Q6Q899 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx58Q6Q899 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Ddx58Q6Q899 Gm43347-201ENSMUST00000200226 580 ntBASIC20.47■□□□□ 0.87
Ddx58Q6Q899 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.47■□□□□ 0.87
Ddx58Q6Q899 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx58Q6Q899 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.47■□□□□ 0.87
Ddx58Q6Q899 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx58Q6Q899 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Ddx58Q6Q899 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Ddx58Q6Q899 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Ddx58Q6Q899 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Gm44454-201ENSMUST00000198541 138 ntBASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx58Q6Q899 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx58Q6Q899 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx58Q6Q899 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.44■□□□□ 0.86
Ddx58Q6Q899 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx58Q6Q899 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.44■□□□□ 0.86
Ddx58Q6Q899 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ddx58Q6Q899 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx58Q6Q899 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.44■□□□□ 0.86
Ddx58Q6Q899 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx58Q6Q899 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx58Q6Q899 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.44■□□□□ 0.86
Ddx58Q6Q899 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx58Q6Q899 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx58Q6Q899 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx58Q6Q899 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx58Q6Q899 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx58Q6Q899 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms