Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nup98Q6PFD9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup98Q6PFD9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup98Q6PFD9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup98Q6PFD9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup98Q6PFD9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup98Q6PFD9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nup98Q6PFD9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nup98Q6PFD9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.47■□□□□ 0.71
Nup98Q6PFD9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup98Q6PFD9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Nup98Q6PFD9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup98Q6PFD9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.47■□□□□ 0.71
Nup98Q6PFD9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nup98Q6PFD9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.46■□□□□ 0.71
Nup98Q6PFD9 Gm13216-201ENSMUST00000117145 591 ntBASIC19.46■□□□□ 0.71
Nup98Q6PFD9 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.46■□□□□ 0.71
Nup98Q6PFD9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup98Q6PFD9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Nup98Q6PFD9 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.46■□□□□ 0.71
Nup98Q6PFD9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup98Q6PFD9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup98Q6PFD9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.46■□□□□ 0.71
Nup98Q6PFD9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup98Q6PFD9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nup98Q6PFD9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.46■□□□□ 0.71
Nup98Q6PFD9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup98Q6PFD9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup98Q6PFD9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup98Q6PFD9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nup98Q6PFD9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nup98Q6PFD9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nup98Q6PFD9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Nup98Q6PFD9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup98Q6PFD9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup98Q6PFD9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.45■□□□□ 0.7
Nup98Q6PFD9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.45■□□□□ 0.7
Nup98Q6PFD9 Gm11780-201ENSMUST00000136880 516 ntBASIC19.45■□□□□ 0.7
Nup98Q6PFD9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Nup98Q6PFD9 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.45■□□□□ 0.7
Nup98Q6PFD9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup98Q6PFD9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Nup98Q6PFD9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Gm15173-201ENSMUST00000122049 433 ntBASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nup98Q6PFD9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.43■□□□□ 0.7
Nup98Q6PFD9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup98Q6PFD9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup98Q6PFD9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup98Q6PFD9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup98Q6PFD9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.43■□□□□ 0.7
Nup98Q6PFD9 Gm1401-201ENSMUST00000122048 772 ntBASIC19.43■□□□□ 0.7
Nup98Q6PFD9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nup98Q6PFD9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.43■□□□□ 0.7
Nup98Q6PFD9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nup98Q6PFD9 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.43■□□□□ 0.7
Nup98Q6PFD9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup98Q6PFD9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nup98Q6PFD9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Nup98Q6PFD9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Gm4995-201ENSMUST00000117247 432 ntBASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Gm13418-201ENSMUST00000119097 944 ntBASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Gm6089-201ENSMUST00000197666 938 ntBASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup98Q6PFD9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms