Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Snrnp40Q6PE01 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Snrnp40Q6PE01 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Gm2756-201ENSMUST00000195851 400 ntBASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Snrnp40Q6PE01 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Snrnp40Q6PE01 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Snrnp40Q6PE01 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms