Protein–RNA interactions for Protein: Q6P4T2

Snrnp200, U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200Q6P4T2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Gm45328-201ENSMUST00000210942 917 ntBASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Snrnp200Q6P4T2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Snrnp200Q6P4T2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 Gm6623-201ENSMUST00000173570 544 ntBASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Snrnp200Q6P4T2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 Gm13216-201ENSMUST00000117145 591 ntBASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Snrnp200Q6P4T2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms