Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sp140Q6NSQ5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sp140Q6NSQ5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Sp140Q6NSQ5 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sp140Q6NSQ5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sp140Q6NSQ5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sp140Q6NSQ5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sp140Q6NSQ5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.83■□□□□ 0.28
Sp140Q6NSQ5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.83■□□□□ 0.28
Sp140Q6NSQ5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sp140Q6NSQ5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sp140Q6NSQ5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sp140Q6NSQ5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Sp140Q6NSQ5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sp140Q6NSQ5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.83■□□□□ 0.28
Sp140Q6NSQ5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sp140Q6NSQ5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sp140Q6NSQ5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sp140Q6NSQ5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sp140Q6NSQ5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
Sp140Q6NSQ5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Gm13559-201ENSMUST00000120476 863 ntBASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sp140Q6NSQ5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Gm10566-201ENSMUST00000086739 996 ntBASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sp140Q6NSQ5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Gm2274-201ENSMUST00000184539 609 ntBASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sp140Q6NSQ5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Sp140Q6NSQ5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sp140Q6NSQ5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sp140Q6NSQ5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sp140Q6NSQ5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sp140Q6NSQ5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sp140Q6NSQ5 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.79■□□□□ 0.28
Sp140Q6NSQ5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sp140Q6NSQ5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms