Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
VclQ64727 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VclQ64727 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VclQ64727 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VclQ64727 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VclQ64727 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VclQ64727 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VclQ64727 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VclQ64727 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
VclQ64727 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
VclQ64727 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.32■□□□□ 0.2
VclQ64727 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VclQ64727 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VclQ64727 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VclQ64727 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VclQ64727 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
VclQ64727 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
VclQ64727 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.31■□□□□ 0.2
VclQ64727 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
VclQ64727 Gm11336-201ENSMUST00000118168 334 ntBASIC16.31■□□□□ 0.2
VclQ64727 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 Gm37722-201ENSMUST00000193757 208 ntBASIC16.31■□□□□ 0.2
VclQ64727 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VclQ64727 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.3■□□□□ 0.2
VclQ64727 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.3■□□□□ 0.2
VclQ64727 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.3■□□□□ 0.2
VclQ64727 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VclQ64727 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
VclQ64727 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.3■□□□□ 0.2
VclQ64727 Gm6345-202ENSMUST00000180900 204 ntBASIC16.3■□□□□ 0.2
VclQ64727 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.3■□□□□ 0.2
VclQ64727 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.3■□□□□ 0.2
VclQ64727 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VclQ64727 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VclQ64727 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VclQ64727 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VclQ64727 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VclQ64727 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VclQ64727 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VclQ64727 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.29■□□□□ 0.2
VclQ64727 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VclQ64727 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VclQ64727 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.29■□□□□ 0.2
VclQ64727 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VclQ64727 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VclQ64727 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VclQ64727 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VclQ64727 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VclQ64727 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VclQ64727 Phf7-203ENSMUST00000226565 1971 ntBASIC16.29■□□□□ 0.2
VclQ64727 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VclQ64727 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VclQ64727 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VclQ64727 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VclQ64727 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VclQ64727 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.29■□□□□ 0.2
VclQ64727 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VclQ64727 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VclQ64727 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VclQ64727 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VclQ64727 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VclQ64727 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VclQ64727 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms