Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.34■□□□□ 0.53
Ecm1Q61508 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.34■□□□□ 0.53
Ecm1Q61508 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.34■□□□□ 0.53
Ecm1Q61508 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ecm1Q61508 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ecm1Q61508 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ecm1Q61508 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ecm1Q61508 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.33■□□□□ 0.53
Ecm1Q61508 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ecm1Q61508 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ecm1Q61508 Gm11779-201ENSMUST00000118541 368 ntBASIC18.33■□□□□ 0.52
Ecm1Q61508 Gm11594-201ENSMUST00000122313 162 ntBASIC18.33■□□□□ 0.52
Ecm1Q61508 Gm12497-201ENSMUST00000138778 237 ntBASIC18.33■□□□□ 0.52
Ecm1Q61508 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.33■□□□□ 0.52
Ecm1Q61508 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ecm1Q61508 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Ecm1Q61508 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
Ecm1Q61508 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.33■□□□□ 0.52
Ecm1Q61508 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ecm1Q61508 Psmb5-202ENSMUST00000227257 622 ntBASIC18.33■□□□□ 0.52
Ecm1Q61508 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Ecm1Q61508 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ecm1Q61508 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ecm1Q61508 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ecm1Q61508 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ecm1Q61508 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.32■□□□□ 0.52
Ecm1Q61508 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ecm1Q61508 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ecm1Q61508 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.32■□□□□ 0.52
Ecm1Q61508 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ecm1Q61508 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ecm1Q61508 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.32■□□□□ 0.52
Ecm1Q61508 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ecm1Q61508 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Ecm1Q61508 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ecm1Q61508 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ecm1Q61508 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ecm1Q61508 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ecm1Q61508 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ecm1Q61508 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ecm1Q61508 Gm4459-201ENSMUST00000118750 468 ntBASIC18.31■□□□□ 0.52
Ecm1Q61508 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.31■□□□□ 0.52
Ecm1Q61508 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.31■□□□□ 0.52
Ecm1Q61508 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
Ecm1Q61508 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Ecm1Q61508 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ecm1Q61508 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ecm1Q61508 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ecm1Q61508 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Ecm1Q61508 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ecm1Q61508 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ecm1Q61508 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ecm1Q61508 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ecm1Q61508 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ecm1Q61508 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ecm1Q61508 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ecm1Q61508 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.3■□□□□ 0.52
Ecm1Q61508 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ecm1Q61508 Gm8097-201ENSMUST00000117903 829 ntBASIC18.3■□□□□ 0.52
Ecm1Q61508 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ecm1Q61508 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.3■□□□□ 0.52
Ecm1Q61508 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.3■□□□□ 0.52
Ecm1Q61508 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.3■□□□□ 0.52
Ecm1Q61508 Gm6089-201ENSMUST00000197666 938 ntBASIC18.3■□□□□ 0.52
Ecm1Q61508 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.3■□□□□ 0.52
Ecm1Q61508 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ecm1Q61508 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.3■□□□□ 0.52
Ecm1Q61508 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ecm1Q61508 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ecm1Q61508 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ecm1Q61508 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ecm1Q61508 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.3■□□□□ 0.52
Ecm1Q61508 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ecm1Q61508 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ecm1Q61508 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ecm1Q61508 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.3■□□□□ 0.52
Ecm1Q61508 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ecm1Q61508 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ecm1Q61508 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ecm1Q61508 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ecm1Q61508 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ecm1Q61508 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ecm1Q61508 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Ecm1Q61508 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms